BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB015E09LP1|AL426864
(888 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig777 1717 0.0
3x_Contig65 330 4e-90
>3x_Contig777
Length = 2076
Score = 1717 bits (865), Expect = 0.0
Identities = 884/889 (99%), Gaps = 2/889 (0%)
Strand = Plus / Minus
Query: 1 gcgcactgtattgtgcatttcccaggtgcgaaaattagatgtaaatagtagcttagctgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1319 gcgcactgtattgtgcatttcccaggtgcgaaaattagatgtaaatagtagcttagctgt 1260
Query: 61 agtaattcttctttgtagtaaaagtttgaaacttaaacaaacaatttttctaggtcctgt 120
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1259 ag-aattcttctttgtagtaaaagtttgaaacttaaacaaacaatttttctaggtcctgt 1201
Query: 121 ttgagattcccaaatcttcgaaatttcagattctcacatatctgtttcctattgcagcaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1200 ttgagattcccaaatcttcgaaatttcagattctcacatatctgtttcctattgcagcaa 1141
Query: 181 tatgccaaaaaatgtaggctttttttttatgtataatattttttctattaatatctgaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1140 tatgccaaaaaatgtaggctttttttttatgtataatattttttctattaatatctgaga 1081
Query: 241 agtctcaatcaatggagagcctggctctcccaccctgtccactggcattctccttccgaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1080 agtctcaatcaatggagagcctggctctcccaccctgtccactggcattctccttccgaa 1021
Query: 301 aggcggtgcatacactgccatgaagacactacctcactgttacccctcacattgggtaat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1020 aggcggtgcatacactgccatgaagacactacctcactgttacccctcacattgggtaat 961
Query: 361 tgcttatctaactatatggtactctatccatggacagttgtttatccacgtgacactaac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 960 tgcttatctaactatatggtactctatccatggacagttgtttatccacgtgacactaac 901
Query: 421 ttttttaaacttttcctgattatgtaagttttttccatttttagttcgatagacacgtca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 900 ttttttaaacttttcctgattatgtaagttttttccatttttagttcgatagacacgtca 841
Query: 481 tgtctcaaaaattactgtaggaagcatgccgccaaaattccattttccctttcttggtac 540
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 840 tgtctcaaaaattactgtaggaagcatgctgccaaaattccattttccctttcttggtac 781
Query: 541 tctagtttctaaggttacgcgcctcgaaagccaaaaaagcgaagatctcgacattgctat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 780 tctagtttctaaggttacgcgcctcgaaagccaaaaaagcgaagatctcgacattgctat 721
Query: 601 ttttattttagtgcttgacagtttacctttttactagcaaagttcgcagctataccggaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 720 ttttattttagtgcttgacagtttacctttttactagcaaagttcgcagctataccggaa 661
Query: 661 cgagcagaatagttctctaagggccggagtattttttatttattctgtttgttgacttat 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 660 cgagcagaatagttctctaagggccggagtattttttatttattctgtttgttgacttat 601
Query: 721 ttctggagtwaacgtcgcgtcgttttgtttacatagctagttactgcataattataagaa 780
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 ttctggagtaaacgtcgcgtcgttttgtttacatagctagttactgcataattataagaa 541
Query: 781 actccggtgatccttacagtagccactgaatgagcttatgcatcataattttcgggttat 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 actccggtgatccttacagtagccactgaatgagcttatgcatcataattttcgggttat 481
Query: 841 tgtggtgcaatawctgctctaatcgttgtgtc-acagttcgatgtggtt 888
|||||||||||| ||||||||||||||||||| ||||||||||||||||
Sbjct: 480 tgtggtgcaatatctgctctaatcgttgtgtcaacagttcgatgtggtt 432
>3x_Contig65
Length = 984
Score = 330 bits (166), Expect = 4e-90
Identities = 323/374 (86%), Gaps = 1/374 (0%)
Strand = Plus / Minus
Query: 259 gcctggctctcccaccctgtccactggcattctccttccgaaaggcggtgcatacactgc 318
||||||||||||| |||||||| ||||| ||||||||||| |||||||| | | ||||
Sbjct: 373 gcctggctctccccccctgtcccctggccttctccttccgcccggcggtgcctcccctgc 314
Query: 319 catgaagacactacctcactgttacccctcacattgggtaattgcttatctaactatatg 378
| || | | || |||| ||||| |||||| | |||||| |||||| ||| || | ||
Sbjct: 313 cctgccgcccctccctccctgttccccctccccttgggtccttgcttctctccctctctg 254
Query: 379 gtactctatccatggacagttgtttatccacgtgacactaacttttttaaacttttcctg 438
|| |||| ||| ||| | ||||||| ||| |||| | || ||||||| |||||||||||
Sbjct: 253 gtcctctctccctggcccgttgtttctccccgtgcccctcccttttttcaacttttcctg 194
Query: 439 attatgtaagttttttccatttttagttcgatagacacgtcatgtctcaaaaattactgt 498
||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 attatgtccgtcttttccatttttagttcgatagacacgtcatgtctcaaaaattactgt 134
Query: 499 aggaagcatgccgccaaaattccattttccctttcttggtactctagtttctaaggttac 558
|||| || | ||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 aggacgccccctgccccccttccattttccctttcttggtactctagtttctaaggttac 74
Query: 559 gcgcctcgaaagccaaaaaagcgaagatctcgacattgctatttttattttagtgcttga 618
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73 gcgcctcgaaagccaaaaaagcgaagatctcgacattgctatttttattttagtgcttga 14
Query: 619 cagtttaccttttt 632
||| ||||||||||
Sbjct: 13 cag-ttaccttttt 1
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7046
Number of Sequences: 1807
Number of extensions: 7046
Number of successful extensions: 49
Number of sequences better than 1.0e-20: 2
length of query: 888
length of database: 10,358,551
effective HSP length: 16
effective length of query: 872
effective length of database: 10,329,639
effective search space: 9007445208
effective search space used: 9007445208
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)